Generally, the biodiesel quality can be influenced by several factors:

The quality of the feedstock.

The fatty acid composition of the parent vegetable oil or animal fat.

The production process and the other materials used in this process.

Post-production parameters.

1.2 Production process factors

1.2.1 Reaction

The most important issue during biodiesel production is the completeness of the transesterification reaction. The triglycerides are converted to diglycerides, which in turn are converted to monoglycerides, and then to glycerol. Each step produces a molecule of a methyl or ethyl ester of a fatty acid. If the reaction is incomplete, then there will be triglycerides, diglycerides, and monoglycerides left in the reaction mixture. Each of these compounds still contains a glycerol molecule that has not been released. The glycerol portion of these compounds is referred to as bound glycerol. When the bound glycerol is added to the free glycerol, the sum is known as the total glycerol.

1.2.2 Free glycerol

Free glycerol refers to the amount of glycerol that is left in the finished biodiesel. Glycerol is essentially insoluble in biodiesel so almost all of the glycerol is easily removed by settling or centrifugation. Free glycerol may remain either as suspended droplets or as the very small amount that is dissolved in the biodiesel. Alcohol can act as co-solvent to increase the solubility of glycerol in the biodiesel. Most of this glycerol should be removed during the purification process. Water-washed fuel is generally very low in free glycerol, especially if hot water is used for washing. Distilled biodiesel tends to have a greater problem with free glycerol due to glycerol carry-over during distillation. Fuel with excessive free glycerol will usually have a problem with glycerol settling out in storage tanks, creating a very viscous mixture that can plug fuel filters and cause combustion problems in the engine.